{{Rsnum
|rsid=10065172
|Gene=IRGM
|Chromosome=5
|position=150848436
|Orientation=plus
|GMAF=0.2764
|Assembly=GRCh38
|GenomeBuild=38.1
|dbSNPBuild=141
|geno1=(C;C)
|geno2=(C;T)
|geno3=(T;T)
|Gene_s=IRGM
}}{{ population diversity
| geno1=(C;C)
| geno2=(C;T)
| geno3=(T;T)
| CEU | 95.3 | 4.7 | 0.0
| HCB | 33.3 | 48.9 | 17.8
| JPT | 42.2 | 37.8 | 20.0
| YRI | 25.0 | 45.0 | 30.0
| ASW | 0.0 | 0.0 | 0.0
| CHB | 33.3 | 48.9 | 17.8
| CHD | 0.0 | 0.0 | 0.0
| GIH | 0.0 | 0.0 | 0.0
| LWK | 0.0 | 0.0 | 0.0
| MEX | 0.0 | 0.0 | 0.0
| MKK | 0.0 | 0.0 | 0.0
| TSI | 0.0 | 0.0 | 0.0
| HapMapRevision=28
}}{{omim
|desc=INFLAMMATORY BOWEL DISEASE 19; IBD19
|id=612278
|rsnum=10065172
}}

{{omim
|desc=IMMUNITY-RELATED GTPase FAMILY, M; IRGM
|id=608212
|rsnum=10065172
}}

{{PMID Auto
|PMID=21283700
|Title=Polymorphic Allele of Human IRGM1 Is Associated with Susceptibility to Tuberculosis in African Americans
|OA=1
}}

[http://varigenome.blogspot.com/2011/02/synonymous-snps-are-not-so-synonymous.html blog] summary of {{PMID|21278745}} says 
:The exonic SNP c.313C>T (rs10065172) is in perfect linkage disequilibrium (r2=1.0) with a deletion polymorphism of 20 kbp mapping upstream of the [[IRGM]] gene. This deletion has been strongly associated with [[Crohn's disease]] in several European populations or those with European ancestry.

{{PMID Auto
|PMID=21508684
|Title=Risk predisposition for Crohn disease: A "ménage à trois" combining IRGM allele, miRNA and xenophagy
}}

{{PMID Auto
|PMID=18985712
|Title=Autophagy gene ATG16L1 but not IRGM is associated with Crohn's disease in Canadian children.
}}

{{PMID Auto
|PMID=19165925
|Title=Deletion polymorphism upstream of IRGM associated with altered IRGM expression and Crohn's disease.
|OA=1
}}

{{PMID Auto
|PMID=19683022
|Title=Lack of association of NKX2-3, IRGM, and ATG16L1 inflammatory bowel disease susceptibility variants with celiac disease.
}}

{{PMID Auto
|PMID=19750224
|Title=Autophagy gene variant IRGM -261T contributes to protection from tuberculosis caused by Mycobacterium tuberculosis but not by M. africanum strains.
|OA=1
}}

{{PMID Auto
|PMID=20106866
|Title=Independent and population-specific association of risk variants at the IRGM locus with Crohn's disease.
|OA=1
}}

{{PMID Auto
|PMID=22508677
|Title=Associations between genetic variants in the IRGM gene and inflammatory bowel diseases in the korean population.
}}

{{PMID Auto
|PMID=24232856
|Title=Association between Variants of the Autophagy Related Gene - IRGM and Susceptibility to Crohn's Disease and Ulcerative Colitis: A Meta-Analysis
|OA=1
}}

{{PMID Auto
|PMID=24247223
|Title=Genetic association and functional role of Crohn disease risk alleles involved in microbial sensing, autophagy, and endoplasmic reticulum (ER) stress
}}

{{PMID Auto
|PMID=24859836
|Title=Functional IRGM polymorphism is associated with language impairment in glioma and upregulates cytokine expressions
}}
{{on chip | 23andMe v3}}
{{on chip | 23andMe v4}}
{{on chip | FTDNA2}}
{{on chip | FTDNA}}