{{Rsnum
|rsid=10951154
|Gene=HOXA1
|Chromosome=7
|position=27095695
|Orientation=plus
|GMAF=0.1983
|Gene_s=HOTAIRM1
|Assembly=GRCh38
|GenomeBuild=38.1
|dbSNPBuild=141
|geno1=(C;C)
|geno2=(C;T)
|geno3=(T;T)
}}{{ population diversity
| geno1=(C;C)
| geno2=(C;T)
| geno3=(T;T)
| CEU | 3.7 | 26.6 | 69.7
| HCB | 0.0 | 0.7 | 99.3
| JPT | 0.0 | 0.9 | 99.1
| YRI | 31.0 | 48.6 | 20.4
| ASW | 21.4 | 62.5 | 16.1
| CHB | 0.0 | 0.7 | 99.3
| CHD | 0.0 | 0.9 | 99.1
| GIH | 0.0 | 9.9 | 90.1
| LWK | 24.1 | 54.6 | 21.3
| MEX | 0.0 | 21.1 | 78.9
| MKK | 14.8 | 45.8 | 39.4
| TSI | 0.0 | 20.6 | 79.4
| HapMapRevision=28
}}mentioned by [[gs240]]

{{PMID Auto
|PMID=21980499
|Title=An Integrated Meta-Analysis of Two Variants in HOXA1/HOXB1 and Their Effect on the Risk of Autism Spectrum Disorders
|OA=1
}}

{{PMID Auto
|PMID=22359339
|Title=Allelic Variation Within the Putative Autism Spectrum Disorder Risk Gene Homeobox A1 and Cerebellar Maturation in Typically Developing Children and Adolescents
|OA=1
}}

{{PMID Auto
|PMID=20678259
|Title=Candidate gene study of HOXB1 in autism spectrum disorder.
|OA=1
}}

{{GET Evidence
|gene=HOXA1
|aa_change=Arg73His
|aa_change_short=R73H
|impact=not reviewed
|qualified_impact=Insufficiently evaluated not reviewed
|inheritance=unknown
|quality_scores=Array
|dbsnp_id=rs10951154
|overall_frequency_n=7834
|overall_frequency_d=10758
|overall_frequency=0.728202
|n_genomes=44
|n_genomes_annotated=0
|n_haplomes=73
|n_articles=0
|n_articles_annotated=0
|qualityscore_in_silico=3
|qualitycomment_in_silico=Y
|gene_in_genetests=Y
|genetests_testable=Y
|genetests_reviewed=Y
|nblosum100=1
|autoscore=3
|n_web_uneval=1
}}

{{PMID Auto
|PMID=25164089
|Title=The OSR1 rs12329305 Polymorphism Contributes to the Development of Congenital Malformations in Cases of Stillborn/Neonatal Death
}}
{{on chip | 23andMe v2}}
{{on chip | 23andMe v3}}
{{on chip | 23andMe v4}}
{{on chip | FTDNA2}}
{{on chip | HumanOmni1Quad}}
{{on chip | Illumina Human 1M}}