{{Rsnum
|rsid=1217407
|Gene=PTPN22
|Chromosome=1
|position=113851126
|Orientation=plus
|GMAF=0.3375
|Gene_s=PTPN22
|Assembly=GRCh38
|GenomeBuild=38.1
|dbSNPBuild=141
|geno1=(A;A)
|geno2=(A;G)
|geno3=(G;G)
}}{{ population diversity
| geno1=(A;A)
| geno2=(A;G)
| geno3=(G;G)
| CEU | 8.8 | 32.7 | 58.4
| HCB | 40.7 | 49.6 | 9.6
| JPT | 29.7 | 53.2 | 17.1
| YRI | 0.0 | 17.5 | 82.5
| ASW | 1.8 | 18.2 | 80.0
| CHB | 40.7 | 49.6 | 9.6
| CHD | 42.2 | 48.6 | 9.2
| GIH | 6.0 | 39.0 | 55.0
| LWK | 1.0 | 28.6 | 70.5
| MEX | 24.6 | 52.6 | 22.8
| MKK | 1.9 | 28.2 | 69.9
| TSI | 7.1 | 40.4 | 52.5
| HapMapRevision=28
}}{{PMID Auto
|PMID=22355377
|Title=Caucasian and asian specific rheumatoid arthritis risk Loci reveal limited replication and apparent allelic heterogeneity in north indians
|OA=1
}}

{{PMID Auto
|PMID=16175503
|Title=PTPN22 genetic variation: evidence for multiple variants associated with rheumatoid arthritis.
|OA=1
}}

{{PMID Auto
|PMID=18840781
|Title=Follow-up analysis of genome-wide association data identifies novel loci for type 1 diabetes.
|OA=1
}}

{{PMID Auto
|PMID=19180477
|Title=Genetic risk factors for rheumatoid arthritis differ in Caucasian and Korean populations.
|OA=1
}}

{{on chip | 23andMe v1}}
{{on chip | 23andMe v2}}
{{on chip | 23andMe v3}}
{{on chip | 23andMe v4}}
{{on chip | Illumina Human 1M}}