{{Rsnum
|rsid=1217413
|Gene=PTPN22
|Chromosome=1
|position=113815128
|Orientation=plus
|GMAF=0.2906
|Assembly=GRCh38
|GenomeBuild=38.1
|dbSNPBuild=141
|geno1=(A;A)
|geno2=(A;G)
|geno3=(G;G)
|Gene_s=PTPN22,RP5-1073O3.2
}}{{ population diversity
| geno1=(A;A)
| geno2=(A;G)
| geno3=(G;G)
| CEU | 63.4 | 28.6 | 8.0
| HCB | 11.8 | 50.0 | 38.2
| JPT | 20.9 | 52.7 | 26.4
| YRI | 100.0 | 0.0 | 0.0
| ASW | 93.0 | 5.3 | 1.8
| CHB | 11.8 | 50.0 | 38.2
| CHD | 10.2 | 49.1 | 40.7
| GIH | 64.0 | 30.0 | 6.0
| LWK | 96.4 | 3.6 | 0.0
| MEX | 42.1 | 43.9 | 14.0
| MKK | 85.9 | 14.1 | 0.0
| TSI | 61.0 | 33.0 | 6.0
| HapMapRevision=28
}}{{PMID Auto
|PMID=19503742
|Title=Evaluation of PTPN22 polymorphisms and Vogt-Koyanagi-Harada disease in Japanese patients
|OA=1
}}

{{PMID Auto
|PMID=16175503
|Title=PTPN22 genetic variation: evidence for multiple variants associated with rheumatoid arthritis.
|OA=1
}}

{{PMID Auto
|PMID=18075792
|Title=PTPN22: its role in SLE and autoimmunity.
|OA=1
}}

{{PMID Auto
|PMID=18341666
|Title=Polymorphisms in the PTPN22 region are associated with psoriasis of early onset.
|OA=1
}}

{{PMID Auto
|PMID=18466461
|Title=Meta-genetic association of rheumatoid arthritis and PTPN22 using PedGenie 2.1.
|OA=1
}}

{{PMID Auto
|PMID=18466529
|Title=Comparing strategies for evaluation of candidate genes in case-control studies using family data.
|OA=1
}}

{{PMID Auto
|PMID=18466531
|Title=Case-control association analysis of rheumatoid arthritis with candidate genes using related cases.
|OA=1
}}

{{PMID Auto
|PMID=18466575
|Title=Comparison of the power of haplotype-based versus single- and multilocus association methods for gene x environment (gene x sex) interactions and application to gene x smoking and gene x sex interactions in rheumatoid arthritis.
|OA=1
}}

{{PMID Auto
|PMID=19180477
|Title=Genetic risk factors for rheumatoid arthritis differ in Caucasian and Korean populations.
|OA=1
}}

{{on chip | 23andMe v3}}
{{on chip | 23andMe v4}}
{{on chip | Illumina Human 1M}}