{{Rsnum
|rsid=12638253
|Gene=LEKR1
|Chromosome=3
|position=156908302
|Orientation=plus
|GMAF=0.4963
|Assembly=GRCh38
|GenomeBuild=38.1
|dbSNPBuild=141
|geno1=(C;C)
|geno2=(C;T)
|geno3=(T;T)
|Gene_s=LEKR1
}}{{ population diversity
| geno1=(C;C)
| geno2=(C;T)
| geno3=(T;T)
| CEU | 25.2 | 54.1 | 20.7
| HCB | 5.9 | 42.6 | 51.5
| JPT | 7.1 | 39.8 | 53.1
| YRI | 81.6 | 17.7 | 0.7
| ASW | 66.7 | 31.6 | 1.8
| CHB | 5.9 | 42.6 | 51.5
| CHD | 5.6 | 34.3 | 60.2
| GIH | 24.0 | 50.0 | 26.0
| LWK | 68.2 | 27.3 | 4.5
| MEX | 15.8 | 47.4 | 36.8
| MKK | 64.5 | 31.6 | 3.9
| TSI | 18.6 | 54.9 | 26.5
| HapMapRevision=28
}}
{{PMID Auto GWAS
|PMID=19010793
|Trait=Multiple sclerosis (severity)
|Title=Genome-wide association analysis of susceptibility and clinical phenotype in multiple sclerosis
|RiskAllele=
|Pval=0.000002
|OR=NR
|ORtxt=NR
}}

{{PharmGKB
|RSID=rs12638253
|Name_s=
|Gene_s=LEKR1
|Feature=
|Evidence=PubMed ID:19010793; Web Resource:http://www.genome.gov/gwastudies/
|Annotation=GWAS results: Genome-wide association analysis of susceptibility and clinical phenotype in multiple sclerosis. (Initial Sample Size: 794 cases, 883 controls; Replication Sample Size: NR); (Region: 3q25.32; Reported Gene(s): FLJ16641; Risk Allele: rs12638253-?); (p-value= 0.000002).This variant is associated with Multiple sclerosis (severity).
|Drugs=
|Drug Classes=
|Diseases=Multiple Sclerosis
|Curation Level=Non-Curated
|PharmGKB Accession ID=PA164740735
}}

{{PMID Auto
|PMID=18985386
|Title=Genomewide association study for susceptibility genes contributing to familial Parkinson disease.
|OA=1
}}

{{PMID Auto
|PMID=19327735
|Title=Genome-wide linkage screen in familial Parkinson disease identifies loci on chromosomes 3 and 18.
|OA=1
}}

{{GET Evidence
|impact=pathogenic
|qualified_impact=Insufficiently evaluated pathogenic
|inheritance=unknown
|quality_scores=Array
|dbsnp_id=rs12638253
|overall_frequency_n=62
|overall_frequency_d=126
|overall_frequency=0.492063
|n_genomes=34
|n_genomes_annotated=0
|n_haplomes=49
|n_articles=0
|n_articles_annotated=0
|in_gwas=Y
|in_pharmgkb=Y
|autoscore=2
|webscore=N
}}

{{on chip | 23andMe v1}}
{{on chip | 23andMe v2}}
{{on chip | 23andMe v3}}
{{on chip | 23andMe v4}}
{{on chip | Affy GenomeWide 6}}
{{on chip | Illumina Human 1M}}