{{Rsnum
|rsid=12994997
|Gene=ATG16L1
|Chromosome=2
|position=233264857
|Orientation=plus
|GMAF=0.3875
|Gene_s=ATG16L1
|Assembly=GRCh38
|GenomeBuild=38.1
|dbSNPBuild=141
|geno1=(A;A)
|geno2=(A;G)
|geno3=(G;G)
}}{{ population diversity
| geno1=(A;A)
| geno2=(A;G)
| geno3=(G;G)
| CEU | 30.1 | 54.9 | 15.0
| HCB | 13.9 | 44.5 | 41.6
| JPT | 3.5 | 37.2 | 59.3
| YRI | 8.2 | 35.6 | 56.2
| ASW | 5.3 | 40.4 | 54.4
| CHB | 13.9 | 44.5 | 41.6
| CHD | 5.5 | 36.7 | 57.8
| GIH | 23.8 | 48.5 | 27.7
| LWK | 7.3 | 30.9 | 61.8
| MEX | 13.8 | 34.5 | 51.7
| MKK | 5.1 | 46.2 | 48.7
| TSI | 24.5 | 60.8 | 14.7
| HapMapRevision=28
}}{{PMID Auto GWAS
  |PMID=23128233
  |Trait=Crohn's disease
  |Title=Host-microbe interactions have shaped the genetic architecture of inflammatory bowel disease.
  |RiskAllele=A
  |Pval=4E-70
  |OR=1.23
  |ORtxt=[1.193-1.274]
  |OA=1
}}

{{on chip | FTDNA}}
{{on chip | Illumina Human 1M}}