{{Rsnum
|rsid=1529316
|Gene=CSMD1
|Chromosome=8
|position=3970616
|Orientation=plus
|GMAF=0.3829
|Assembly=GRCh38
|GenomeBuild=38.1
|dbSNPBuild=141
|geno1=(C;C)
|geno2=(C;T)
|geno3=(T;T)
|Gene_s=CSMD1
}}{{ population diversity
| geno1=(C;C)
| geno2=(C;T)
| geno3=(T;T)
| CEU | 29.2 | 50.4 | 20.4
| HCB | 2.9 | 28.5 | 68.6
| JPT | 6.2 | 26.8 | 67.0
| YRI | 15.8 | 47.9 | 36.3
| ASW | 17.5 | 50.9 | 31.6
| CHB | 2.9 | 28.5 | 68.6
| CHD | 2.8 | 37.6 | 59.6
| GIH | 20.8 | 40.6 | 38.6
| LWK | 13.8 | 56.9 | 29.4
| MEX | 13.8 | 58.6 | 27.6
| MKK | 26.9 | 52.6 | 20.5
| TSI | 24.5 | 51.0 | 24.5
| HapMapRevision=28
}}
{{PMID Auto GWAS
|PMID=19010793
|Trait=Multiple sclerosis
|Title=Genome-wide association analysis of susceptibility and clinical phenotype in multiple sclerosis
|RiskAllele=
|Pval=0.000002
|OR=1.36
|ORtxt=[NR]
}}

{{PharmGKB
|RSID=rs1529316
|Name_s=
|Gene_s=CSMD1
|Feature=
|Evidence=PubMed ID:19010793; Web Resource:http://www.genome.gov/gwastudies/
|Annotation=GWAS results: Genome-wide association analysis of susceptibility and clinical phenotype in multiple sclerosis. (Initial Sample Size: 978 cases, 883 controls; Replication Sample Size: NR); (Region: 8p23.2; Reported Gene(s): CSMD1; Risk Allele: rs1529316-?); (p-value= 0.000002).This variant is associated with Multiple sclerosis.
|Drugs=
|Drug Classes=
|Diseases=Multiple Sclerosis
|Curation Level=Non-Curated
|PharmGKB Accession ID=PA164740713
}}

{{PMID|20944657}} Replication of top markers of a genome-wide association study in multiple sclerosis in Spain.

{{GET Evidence
|impact=pathogenic
|qualified_impact=Insufficiently evaluated pathogenic
|inheritance=unknown
|quality_scores=Array
|dbsnp_id=rs1529316
|overall_frequency_n=67
|overall_frequency_d=128
|overall_frequency=0.523438
|n_genomes=43
|n_genomes_annotated=0
|n_haplomes=57
|n_articles=0
|n_articles_annotated=0
|in_gwas=Y
|in_pharmgkb=Y
|autoscore=2
|webscore=N
}}

{{on chip | 23andMe v1}}
{{on chip | 23andMe v2}}
{{on chip | 23andMe v3}}
{{on chip | 23andMe v4}}
{{on chip | Affy GenomeWide 6}}
{{on chip | Illumina Human 1M}}