{{Rsnum
|rsid=1574192
|Chromosome=2
|position=240369088
|Orientation=minus
|GMAF=0.2062
|Assembly=GRCh38
|GenomeBuild=38.1
|dbSNPBuild=141
|geno1=(C;C)
|geno2=(C;T)
|geno3=(T;T)
}}{{ population diversity
| geno1=(C;C)
| geno2=(C;T)
| geno3=(T;T)
| CEU | 36.3 | 48.7 | 15.0
| HCB | 97.8 | 2.2 | 0.0
| JPT | 94.7 | 5.3 | 0.0
| YRI | 93.9 | 6.1 | 0.0
| ASW | 77.2 | 15.8 | 7.0
| CHB | 97.8 | 2.2 | 0.0
| CHD | 0.0 | 0.0 | 0.0
| GIH | 80.2 | 19.8 | 0.0
| LWK | 90.0 | 10.0 | 0.0
| MEX | 68.4 | 31.6 | 0.0
| MKK | 82.7 | 16.0 | 1.3
| TSI | 39.2 | 39.2 | 21.6
| HapMapRevision=28
}}
{{PMID Auto GWAS
|PMID=19023125
|Trait=Brain imaging in schizophrenia (interaction)
|Title=A Genome-Wide Association Study of Schizophrenia Using Brain Activation as a Quantitative Phenotype
|RiskAllele=
|Pval=0.000004
|OR=NR
|ORtxt=NR
|OA=1
}}

{{PMID|19023125|OA=1
}} less than 10^-6 p-value interaction with quantitative trait (mean oxygen level-dependent signal in the DLPFC while performing a working memory task [SIRP]) measured (among 64 subjects with schizophrenia and 74 matched controls) - [[GPC1]] and [[ROBO2]]-[[ROBO1]] involved in dorsal forebrain development inc. neural precursor migration, axonal connectivity, midline crossing, and axonal guidance

in close proximity to [[GPC1]]

{{PharmGKB
|RSID=rs1574192
|Name_s=
|Gene_s=-
|Feature=
|Evidence=PubMed ID:19023125; Web Resource:http://www.genome.gov/gwastudies/
|Annotation=GWAS results: A Genome-Wide Association Study of Schizophrenia Using Brain Activation as a Quantitative Phenotype. (Initial Sample Size: 64 cases, 74 cases; Replication Sample Size: NR); (Region: 2q37.3; Reported Gene(s): GPC1; Risk Allele: rs1574192-?); (p-value= 0.000004).This variant is associated with Brain imaging in schizophrenia (interaction).
|Drugs=
|Drug Classes=
|Diseases=Schizophrenia
|Curation Level=Non-Curated
|PharmGKB Accession ID=PA164740329
}}

{{GET Evidence
|impact=pathogenic
|qualified_impact=Insufficiently evaluated pathogenic
|inheritance=unknown
|quality_scores=Array
|dbsnp_id=rs1574192
|overall_frequency_n=21
|overall_frequency_d=128
|overall_frequency=0.164062
|n_genomes=16
|n_genomes_annotated=0
|n_haplomes=16
|n_articles=0
|n_articles_annotated=0
|in_gwas=Y
|in_pharmgkb=Y
|autoscore=2
|webscore=N
}}

{{on chip | 23andMe v1}}
{{on chip | 23andMe v2}}
{{on chip | 23andMe v3}}
{{on chip | 23andMe v4}}
{{on chip | Illumina Human 1M}}