{{Rsnum
|rsid=1599971
|Gene=PTPN22
|Chromosome=1
|position=113834471
|Orientation=plus
|GMAF=0.337
|Assembly=GRCh38
|GenomeBuild=38.1
|dbSNPBuild=141
|geno1=(C;C)
|geno2=(C;T)
|geno3=(T;T)
|Gene_s=PTPN22,RP5-1073O3.2
}}{{ population diversity
| geno1=(C;C)
| geno2=(C;T)
| geno3=(T;T)
| CEU | 59.3 | 31.9 | 8.8
| HCB | 10.9 | 48.2 | 40.9
| JPT | 19.5 | 50.4 | 30.1
| YRI | 86.4 | 13.6 | 0.0
| ASW | 80.7 | 17.5 | 1.8
| CHB | 10.9 | 48.2 | 40.9
| CHD | 9.2 | 48.6 | 42.2
| GIH | 54.5 | 39.6 | 5.9
| LWK | 74.5 | 24.5 | 0.9
| MEX | 25.9 | 50.0 | 24.1
| MKK | 71.2 | 27.6 | 1.3
| TSI | 53.9 | 39.2 | 6.9
| HapMapRevision=28
}}

{{PMID Auto
|PMID=16175503
|Title=PTPN22 genetic variation: evidence for multiple variants associated with rheumatoid arthritis.
|OA=1
}}

{{PMID Auto
|PMID=19180477
|Title=Genetic risk factors for rheumatoid arthritis differ in Caucasian and Korean populations.
|OA=1
}}

{{PMID Auto
|PMID=20615141
|Title=Association of the protein tyrosine phosphatase nonreceptor 22 haplotypes with autoimmune thyroid disease in the Japanese population.
}}

{{on chip | 23andMe v3}}
{{on chip | 23andMe v4}}