{{Rsnum
|rsid=2230061
|Gene=CTSS
|Chromosome=1
|position=150755063
|Orientation=minus
|GMAF=0.3517
|Assembly=GRCh38
|GenomeBuild=38.1
|dbSNPBuild=141
|geno1=(C;C)
|geno2=(C;T)
|geno3=(T;T)
|Gene_s=CTSS
}}{{ population diversity
| geno1=(C;C)
| geno2=(C;T)
| geno3=(T;T)
| CEU | 42.0 | 41.1 | 17.0
| HCB | 39.0 | 49.3 | 11.8
| JPT | 39.8 | 42.5 | 17.7
| YRI | 49.0 | 44.9 | 6.1
| ASW | 66.7 | 26.3 | 7.0
| CHB | 39.0 | 49.3 | 11.8
| CHD | 45.9 | 43.1 | 11.0
| GIH | 20.8 | 34.7 | 44.6
| LWK | 59.1 | 33.6 | 7.3
| MEX | 31.0 | 48.3 | 20.7
| MKK | 44.2 | 46.2 | 9.6
| TSI | 33.7 | 47.5 | 18.8
| HapMapRevision=28
}}{{PMID Auto
|PMID=17601350
|Title=A genetic association analysis of cognitive ability and cognitive ageing using 325 markers for 109 genes associated with oxidative stress or cognition.
|OA=1
}}

{{PMID Auto
|PMID=18565099
|Title=Cathepsin S genotypes are associated with Apo-A1 and HDL-cholesterol in lean and obese French populations.
}}{{GET Evidence
|gene=CTSS
|aa_change=Arg113Trp
|aa_change_short=R113W
|impact=not reviewed
|qualified_impact=Insufficiently evaluated not reviewed
|inheritance=unknown
|quality_scores=Array
|dbsnp_id=rs2230061
|overall_frequency_n=3553
|overall_frequency_d=10758
|overall_frequency=0.330266
|n_genomes=29
|n_genomes_annotated=0
|n_haplomes=34
|n_articles=0
|n_articles_annotated=0
|pph2_score=0.241
|nblosum100=7
|autoscore=0
|webscore=N
}}
{{PMID Auto GWAS
  |PMID=24064335
  |Trait=Fat body mass
  |Title=Meta-analysis of genome-wide association data identifies novel susceptibility loci for obesity.
  |RiskAllele=A
  |Pval=4E-8
  |OR=.06
  |ORtxt=[0.040-0.080] unit decrease
  }}