{{Rsnum
|rsid=2230600
|Gene=PTPN13
|Chromosome=4
|position=86769845
|Orientation=plus
|GMAF=0.1855
|Gene_s=PTPN13
|Assembly=GRCh38
|GenomeBuild=38.1
|dbSNPBuild=141
|geno1=(A;A)
|geno2=(A;G)
|geno3=(G;G)
}}{{ population diversity
| geno1=(A;A)
| geno2=(A;G)
| geno3=(G;G)
| CEU | 71.7 | 22.1 | 6.2
| HCB | 46.3 | 47.8 | 5.9
| JPT | 41.6 | 46.0 | 12.4
| YRI | 100.0 | 0.0 | 0.0
| ASW | 87.7 | 12.3 | 0.0
| CHB | 46.3 | 47.8 | 5.9
| CHD | 49.1 | 44.4 | 6.5
| GIH | 79.0 | 19.0 | 2.0
| LWK | 97.3 | 2.7 | 0.0
| MEX | 58.9 | 30.4 | 10.7
| MKK | 97.4 | 2.6 | 0.0
| TSI | 68.3 | 31.7 | 0.0
| HapMapRevision=28
}}{{PMID|19892796|OA=1
}}  rs2230600 We found that a significantly increased squamous cell carcinoma of the head and neck risk was associated with the c.4566 I1522M (G;G) genotype [odds ratio (OR), 1.89; 95% confidence interval (CI), 1.27-2.79  

{{GET Evidence
|gene=PTPN13
|aa_change=Ile1527Met
|aa_change_short=I1527M
|impact=not reviewed
|qualified_impact=Insufficiently evaluated not reviewed
|inheritance=unknown
|quality_scores=Array
|dbsnp_id=rs2230600
|overall_frequency_n=1179
|overall_frequency_d=9518
|overall_frequency=0.123871
|n_genomes=14
|n_genomes_annotated=0
|n_haplomes=15
|n_articles=0
|n_articles_annotated=0
|nblosum100=-1
|autoscore=0
|webscore=N
}}

{{on chip | 23andMe v1}}
{{on chip | 23andMe v2}}
{{on chip | 23andMe v3}}
{{on chip | 23andMe v4}}
{{on chip | Affy GenomeWide 6}}
{{on chip | FTDNA2}}
{{on chip | FTDNA}}
{{on chip | HumanOmni1Quad}}
{{on chip | Illumina Human 1M}}