{{Rsnum
|rsid=2476599
|Gene=PTPN22
|Chromosome=1
|position=113820837
|Orientation=plus
|GMAF=0.2938
|Assembly=GRCh38
|GenomeBuild=38.1
|dbSNPBuild=141
|geno1=(A;A)
|geno2=(A;G)
|geno3=(G;G)
|Gene_s=PTPN22,RP5-1073O3.2
}}{{ population diversity
| geno1=(A;A)
| geno2=(A;G)
| geno3=(G;G)
| CEU | 5.5 | 37.3 | 57.3
| HCB | 0.0 | 15.6 | 84.4
| JPT | 2.3 | 25.0 | 72.7
| YRI | 51.4 | 39.7 | 8.9
| ASW | 43.9 | 36.8 | 19.3
| CHB | 0.0 | 15.6 | 84.4
| CHD | 0.0 | 9.5 | 90.5
| GIH | 7.0 | 41.0 | 52.0
| LWK | 45.5 | 40.0 | 14.5
| MEX | 3.5 | 22.8 | 73.7
| MKK | 31.0 | 46.5 | 22.6
| TSI | 4.0 | 39.0 | 57.0
| HapMapRevision=28
}}{{PMID Auto
|PMID=20615141
|Title=Association of the Protein Tyrosine Phosphatase Nonreceptor 22 Haplotypes with Autoimmune Thyroid Disease in the Japanese Population
}}

{{PMID Auto
|PMID=16175503
|Title=PTPN22 genetic variation: evidence for multiple variants associated with rheumatoid arthritis.
|OA=1
}}

{{on chip | 23andMe v1}}
{{on chip | 23andMe v2}}
{{on chip | 23andMe v3}}
{{on chip | 23andMe v4}}
{{on chip | FTDNA2}}
{{on chip | HumanOmni1Quad}}
{{on chip | Illumina Human 1M}}