{{Rsnum
|rsid=2836754
|Gene=FLJ45139
|Chromosome=21
|position=38919816
|Orientation=plus
|GMAF=0.4302
|Gene_s=SLC36A4
|Assembly=GRCh38
|GenomeBuild=38.1
|dbSNPBuild=141
|geno1=(C;C)
|geno2=(C;T)
|geno3=(T;T)
}}{{ population diversity
| geno1=(C;C)
| geno2=(C;T)
| geno3=(T;T)
| CEU | 39.8 | 48.7 | 11.5
| HCB | 13.9 | 46.0 | 40.1
| JPT | 6.2 | 32.7 | 61.1
| YRI | 6.8 | 42.2 | 51.0
| ASW | 24.6 | 50.9 | 24.6
| CHB | 13.9 | 46.0 | 40.1
| CHD | 14.7 | 47.7 | 37.6
| GIH | 3.0 | 46.5 | 50.5
| LWK | 3.6 | 31.8 | 64.5
| MEX | 15.5 | 46.6 | 37.9
| MKK | 9.0 | 32.1 | 59.0
| TSI | 41.2 | 44.1 | 14.7
| HapMapRevision=28
}}{{PMID Auto GWAS
|PMID=17554261
|Trait=Crohn's disease
|Title=Sequence variants in the autophagy gene IRGM and multiple other replicating loci contribute to Crohn's disease susceptibility
|RiskAllele=
|Pval=4.9999999999999998E-7
|OR=1.15
|ORtxt=[1.03-1.28]
|OA=1
}}

{{PMID Auto
|PMID=18438406
|Title=Genetic determinants of ulcerative colitis include the ECM1 locus and five loci implicated in Crohn's disease.
|OA=1
}}

{{PMID Auto
|PMID=18853133
|Title=Gene variants influencing measures of inflammation or predisposing to autoimmune and inflammatory diseases are not associated with the risk of type 2 diabetes.
|OA=1
}}

{{PMID Auto
|PMID=19140132
|Title=Unbiased estimation of odds ratios: combining genomewide association scans with replication studies.
|OA=1
}}

{{GET Evidence
|impact=pathogenic
|qualified_impact=Insufficiently evaluated pathogenic
|inheritance=unknown
|quality_scores=Array
|dbsnp_id=rs2836754
|overall_frequency_n=52
|overall_frequency_d=128
|overall_frequency=0.40625
|n_genomes=34
|n_genomes_annotated=0
|n_haplomes=41
|n_articles=0
|n_articles_annotated=0
|in_gwas=Y
|autoscore=1
|webscore=N
}}

{{on chip | 23andMe v2}}
{{on chip | 23andMe v3}}
{{on chip | 23andMe v4}}
{{on chip | Affy GenomeWide 6}}
{{on chip | HumanOmni1Quad}}
{{on chip | Illumina Human 1M}}