{{Rsnum
|rsid=291102
|Gene=PIGR
|Chromosome=1
|position=206933133
|Orientation=minus
|GMAF=0.2296
|Assembly=GRCh38
|GenomeBuild=38.1
|dbSNPBuild=141
|geno1=(C;C)
|geno2=(C;T)
|geno3=(T;T)
|Gene_s=PIGR
}}{{ population diversity
| geno1=(C;C)
| geno2=(C;T)
| geno3=(T;T)
| CEU | 95.6 | 4.4 | 0.0
| HCB | 82.5 | 17.5 | 0.0
| JPT | 69.6 | 26.8 | 3.6
| YRI | 0.7 | 25.2 | 74.1
| ASW | 15.8 | 50.9 | 33.3
| CHB | 82.5 | 17.5 | 0.0
| CHD | 89.9 | 9.2 | 0.9
| GIH | 92.1 | 7.9 | 0.0
| LWK | 7.3 | 43.6 | 49.1
| MEX | 65.5 | 29.3 | 5.2
| MKK | 13.5 | 57.7 | 28.8
| TSI | 97.1 | 2.9 | 0.0
| HapMapRevision=28
}}{{omim
|id=173880
|rsnum=291102
|variant=0001
}}

{{ClinVar
|rsid=291102
|Reversed=1
|FwdREF=C
|FwdALT=T
|REF=G
|ALT=A
|RSPOS=206933133
|CHROM=1
|GMAF=0.2308
|dbSNPBuildID=79
|SSR=0
|SAO=1
|VP=0x050360000a1515051f110101
|GENEINFO=PIGR:5284
|GENE_NAME=PIGR
|GENE_ID=5284
|WGT=1
|VC=SNV
|CLNALLE=1
|CLNHGVS=NC_000001.11:g.206933133G>A
|CLNORIGIN=1
|Tags=RV;PM;S3D;SLO;NSM;REF;OTH;ASP;VLD;G5;HD;GNO;KGPhase1;KGPilot123;KGPROD;OTHERKG;PH3;LSD;OM
|CAF=0.7704; 0.2296
|CLNACC=RCV000014481.1
|CLNDBN=Berger disease
|CLNSRC=ClinVar; OMIM Allelic Variant
|CLNSRCID=NM_002644.3:c.1739C>T; 173880.0001
|COMMON=1
|Disease=Berger disease
|CLNDSDB=MedGen:OMIM
|CLNDSDBID=C0017661:161950
}}

{{GET Evidence
|gene=PIGR
|aa_change=Ala580Val
|aa_change_short=A580V
|impact=pathogenic
|qualified_impact=Low clinical importance, Likely pathogenic
|inheritance=other
|quality_scores=Array
|dbsnp_id=rs291102
|overall_frequency_n=2663
|overall_frequency_d=10758
|overall_frequency=0.247537
|n_genomes=27
|n_genomes_annotated=0
|n_haplomes=39
|n_articles=1
|n_articles_annotated=1
|qualityscore_in_silico=1
|qualitycomment_in_silico=Y
|qualityscore_case_control=4
|qualitycomment_case_control=Y
|qualityscore_familial=0
|qualitycomment_familial=Y
|qualityscore_severity=4
|qualityscore_treatability=2
|in_omim=Y
|pph2_score=0.001
|nblosum100=2
|autoscore=2
|webscore=N
|variant_evidence=0
|clinical_importance=1
|summary_short=In a Japanese study, this variant was associated with an increased risk for immunoglobulin A nephropathy (IgAN), a rare disease. The chances of having this disease, even with this variant, is less than 0.1%.
}}

{{on chip | 23andMe v1}}
{{on chip | 23andMe v2}}
{{on chip | 23andMe v3}}
{{on chip | 23andMe v4}}
{{on chip | FTDNA2}}
{{on chip | HumanOmni1Quad}}
{{on chip | Illumina Human 1M}}