{{Rsnum
|rsid=3135363
|Chromosome=6
|position=32421871
|Orientation=minus
|GMAF=0.2479
|Assembly=GRCh38
|GenomeBuild=38.1
|dbSNPBuild=141
|geno1=(C;C)
|geno2=(C;T)
|geno3=(T;T)
}}{{ population diversity
| geno1=(C;C)
| geno2=(C;T)
| geno3=(T;T)
| CEU | 2.7 | 31.0 | 66.4
| HCB | 12.4 | 45.3 | 42.3
| JPT | 10.6 | 37.2 | 52.2
| YRI | 4.1 | 30.6 | 65.3
| ASW | 3.5 | 17.5 | 78.9
| CHB | 12.4 | 45.3 | 42.3
| CHD | 10.1 | 49.5 | 40.4
| GIH | 4.0 | 27.7 | 68.3
| LWK | 0.0 | 34.5 | 65.5
| MEX | 8.6 | 34.5 | 56.9
| MKK | 4.5 | 42.3 | 53.2
| TSI | 10.8 | 45.1 | 44.1
| HapMapRevision=28
}}{{PMID Auto GWAS
|PMID=21764829
|Trait=None
|Title=A genome-wide association study of hepatitis B vaccine response in an Indonesian population reveals multiple independent risk variants in the HLA region.
|RiskAllele=
|Pval=7E-22
|OR=1.5300
|ORtxt=[1.35-1.74]
}}

{{PMID|19143810|OA=1
}} Haplotype-based search for SNPs associated with differential type 1 diabetes risk among chromosomes carrying a specific HLA DRB1-DQA1-DQB1 haplotype.

{{PMID|19458352|OA=1
}} Primary biliary cirrhosis associated with HLA, IL12A, and IL12RB2 variants.

{{PMID|20018006|OA=1
}} Case-control genome-wide association study of rheumatoid arthritis from Genetic Analysis Workshop 16 using penalized orthogonal-components regression-linear discriminant analysis.

{{PMID|20041220|OA=1
}} Autoimmune disease classification by inverse association with SNP alleles.

{{PMID Auto GWAS
  |PMID=23321320
  |Trait=Hepatitis C induced liver cirrhosis
  |Title=A genome-wide association study of HCV-induced liver cirrhosis in the Japanese population identifies novel susceptibility loci at the MHC region.
  |RiskAllele=C
  |Pval=1E-10
  |OR=1.37
  |ORtxt=[1.24-1.51]
  }}

{{PMID Auto GWAS
  |PMID=24282030
  |Trait=Hepatitis B vaccine response
  |Title=A genome-wide association study identifies polymorphisms in the HLA-DR region associated with non-response to hepatitis B vaccination in Chinese Han populations.
  |RiskAllele=
  |Pval=8E-7
  |OR=1.51
  |ORtxt=[1.28-1.78]
  }}
{{on chip | 23andMe v1}}
{{on chip | 23andMe v2}}
{{on chip | 23andMe v3}}
{{on chip | 23andMe v4}}
{{on chip | Affy GenomeWide 6}}
{{on chip | HumanOmni1Quad}}
{{on chip | Illumina Human 1M}}