{{Rsnum
|rsid=3758249
|Gene=FOXE1
|Chromosome=9
|position=97851858
|Orientation=minus
|GMAF=0.2984
|Assembly=GRCh38
|GenomeBuild=38.1
|dbSNPBuild=141
|geno1=(A;A)
|geno2=(A;G)
|geno3=(G;G)
|Gene_s=FOXE1,RP11-23B15.1
}}{{ population diversity
| geno1=(A;A)
| geno2=(A;G)
| geno3=(G;G)
| CEU | 21.9 | 45.3 | 32.8
| HCB | 4.4 | 28.9 | 66.7
| JPT | 2.3 | 15.9 | 81.8
| YRI | 6.3 | 42.9 | 50.8
| ASW | 0.0 | 0.0 | 0.0
| CHB | 4.4 | 28.9 | 66.7
| CHD | 0.0 | 0.0 | 0.0
| GIH | 0.0 | 0.0 | 0.0
| LWK | 0.0 | 0.0 | 0.0
| MEX | 0.0 | 0.0 | 0.0
| MKK | 0.0 | 0.0 | 0.0
| TSI | 0.0 | 0.0 | 0.0
| HapMapRevision=28
}}{{omim
|desc=FORKHEAD BOX E1; FOXE1
|id=602617
|rsnum=3758249
}}
{{omim
|id=119530
|rsnum=3758249
}}{{PMID Auto
|PMID=19521098
|Title=Genome scan, fine-mapping, and candidate gene analysis of non-syndromic cleft lip with or without cleft palate reveals phenotype-specific differences in linkage and association results.
|OA=1
}}

{{PMID Auto
|PMID=19730683
|Title=The variant rs1867277 in FOXE1 gene confers thyroid cancer susceptibility through the recruitment of USF1/USF2 transcription factors.
|OA=1
}}

{{PMID Auto
|PMID=19779022
|Title=FOXE1 association with both isolated cleft lip with or without cleft palate, and isolated cleft palate.
|OA=1
}}

{{PMID Auto
|PMID=20583170
|Title=Follow-up association studies of chromosome region 9q and nonsyndromic cleft lip/palate.
|OA=1
}}{{PMID Auto
|PMID=23463464
|Title=Replication of genome wide association identified candidate genes confirm the role of common and rare variants in PAX7 and VAX1 in the etiology of nonsyndromic CL(P).
|OA=1
}}