{{Rsnum
|rsid=3789608
|Gene=PTPN22
|Chromosome=1
|position=113855166
|Orientation=plus
|GMAF=0.1593
|Gene_s=MIR223,PTPN22
|Assembly=GRCh38
|GenomeBuild=38.1
|dbSNPBuild=141
|geno1=(C;C)
|geno2=(C;T)
|geno3=(T;T)
}}{{ population diversity
| geno1=(C;C)
| geno2=(C;T)
| geno3=(T;T)
| CEU | 0.0 | 0.0 | 0.0
| HCB | 57.8 | 31.1 | 11.1
| JPT | 56.8 | 29.5 | 13.6
| YRI | 85.5 | 14.5 | 0.0
| ASW | 0.0 | 0.0 | 0.0
| CHB | 57.8 | 31.1 | 11.1
| CHD | 0.0 | 0.0 | 0.0
| GIH | 0.0 | 0.0 | 0.0
| LWK | 0.0 | 0.0 | 0.0
| MEX | 0.0 | 0.0 | 0.0
| MKK | 0.0 | 0.0 | 0.0
| TSI | 0.0 | 0.0 | 0.0
| HapMapRevision=28
}}
{{PMID Auto
|PMID=19503742
|Title=Evaluation of PTPN22 polymorphisms and Vogt-Koyanagi-Harada disease in Japanese patients
|OA=1
}}

{{PMID Auto
|PMID=16175503
|Title=PTPN22 genetic variation: evidence for multiple variants associated with rheumatoid arthritis.
|OA=1
}}

{{on chip | 23andMe v3}}
{{on chip | 23andMe v4}}
{{on chip | HumanOmni1Quad}}