{{Rsnum
|rsid=3890182
|Gene=ABCA1
|Chromosome=9
|position=104885374
|Orientation=plus
|GMAF=0.1033
|Assembly=GRCh38
|GenomeBuild=38.1
|dbSNPBuild=141
|geno1=(A;A)
|geno2=(A;G)
|geno3=(G;G)
|Gene_s=ABCA1
}}{{ population diversity
| geno1=(A;A)
| geno2=(A;G)
| geno3=(G;G)
| CEU | 1.8 | 12.4 | 85.8
| HCB | 0.0 | 13.1 | 86.9
| JPT | 0.0 | 8.8 | 91.2
| YRI | 2.7 | 27.9 | 69.4
| ASW | 0.0 | 21.1 | 78.9
| CHB | 0.0 | 13.1 | 86.9
| CHD | 0.9 | 14.7 | 84.4
| GIH | 0.0 | 13.9 | 86.1
| LWK | 1.8 | 24.5 | 73.6
| MEX | 1.7 | 12.1 | 86.2
| MKK | 5.8 | 41.7 | 52.6
| TSI | 2.0 | 20.6 | 77.5
| HapMapRevision=28
}}{{PMID Auto GWAS
|PMID=18193044
|Trait=HDL cholesterol
|Title=Six new loci associated with blood low-density lipoprotein cholesterol, high-density lipoprotein cholesterol or triglycerides in humans
|RiskAllele=A
|Pval=3E-10
|OR=0.10
|ORtxt=[0.06-0.14]% SD lower
|OA=1
}}

{{omim
|id=600046
|desc=ATP-BINDING CASSETTE, SUBFAMILY A, MEMBER 1; ABCA1
|rsnum=3890182
}}

{{PMID Auto
|PMID=19773416
|Title=A gene score of nine LDL and HDL regulating genes is associated with fluvastatin-induced cholesterol changes in women
|OA=1
}}
{{PMID Auto GWAS
|PMID=20864672
|Trait=None
|Title=Genetic Variants Influencing Circulating Lipid Levels and Risk of Coronary Artery Disease
|RiskAllele=G
|Pval=5E-7
|OR=0.02
|ORtxt=[0.01-0.03] unit increase
|OA=1
}}

{{omim
|id=600046
|rsnum=3890182
|variant=0025
}}

{{PMID Auto
|PMID=18179892
|Title=Genome-wide association study identifies genes for biomarkers of cardiovascular disease: serum urate and dyslipidemia.
|OA=1
}}

{{PMID Auto
|PMID=19041386
|Title=Genetic-epidemiological evidence on genes associated with HDL cholesterol levels: a systematic in-depth review.
|OA=1
}}

{{PMID Auto
|PMID=19060910
|Title=Genome-wide association analysis of metabolic traits in a birth cohort from a founder population.
|OA=1
}}

{{PMID Auto
|PMID=19148283
|Title=Genetic differences between the determinants of lipid profile phenotypes in African and European Americans: the Jackson Heart Study.
|OA=1
}}

{{PMID Auto
|PMID=19197348
|Title=Genome-wide association studies in an isolated founder population from the Pacific Island of Kosrae.
|OA=1
}}

{{PMID Auto
|PMID=19606474
|Title=A survey of ABCA1 sequence variation confirms association with dementia.
|OA=1
}}

{{PMID Auto
|PMID=19951432
|Title=Analysis of recently identified dyslipidemia alleles reveals two loci that contribute to risk for carotid artery disease.
|OA=1
}}

{{PMID Auto
|PMID=20018036
|Title=Using a latent growth curve model for an integrative assessment of the effects of genetic and environmental factors on multiple phenotypes.
|OA=1
}}

{{PMID Auto
|PMID=20502693
|Title=Genetics and beyond--the transcriptome of human monocytes and disease susceptibility.
|OA=1
}}

{{GET Evidence
|impact=pathogenic
|qualified_impact=Insufficiently evaluated pathogenic
|inheritance=unknown
|quality_scores=Array
|dbsnp_id=rs3890182
|overall_frequency_n=18
|overall_frequency_d=128
|overall_frequency=0.140625
|n_genomes=11
|n_genomes_annotated=0
|n_haplomes=13
|n_articles=0
|n_articles_annotated=0
|in_gwas=Y
|autoscore=1
|webscore=N
}}

{{on chip | 23andMe v3}}
{{on chip | 23andMe v4}}
{{on chip | Affy GenomeWide 6}}
{{on chip | HumanOmni1Quad}}