{{Rsnum
|rsid=4280262
|Gene=LITAF
|Chromosome=16
|position=11553636
|Orientation=minus
|ReferenceAllele=A
|MissenseAllele=G
|GMAF=0.129
|Assembly=GRCh38
|GenomeBuild=38.1
|dbSNPBuild=141
|geno1=(A;A)
|geno2=(A;G)
|geno3=(G;G)
|Gene_s=LITAF
}}{{ population diversity
| geno1=(A;A)
| geno2=(A;G)
| geno3=(G;G)
| CEU | 62.8 | 33.6 | 3.5
| HCB | 86.8 | 11.0 | 2.2
| JPT | 86.7 | 12.4 | 0.9
| YRI | 89.8 | 10.2 | 0.0
| ASW | 84.2 | 15.8 | 0.0
| CHB | 86.8 | 11.0 | 2.2
| CHD | 89.9 | 9.2 | 0.9
| GIH | 86.0 | 12.0 | 2.0
| LWK | 92.6 | 7.4 | 0.0
| MEX | 70.7 | 27.6 | 1.7
| MKK | 88.4 | 11.0 | 0.6
| TSI | 58.4 | 31.7 | 9.9
| HapMapRevision=28
}}{{Venter SNP
|rsid=4280262
|allele=C
|frequency=0.183
|uid=1103645426651
|type=heterozygous_SNP
|hugo=LITAF
|ensembl gene=ENSG00000189067
|ensembl transcript=ENST00000339430
|sift=TOLERATED
|disease=Defects in LITAF may be involved in extramammary Paget disease (EMPD) carcinogenesis. EMPD is a cancerous disease representing about 8% of all malignant skin cancers; it usually appears in the anogenital area and can be fatal by metastasizing to internal organs when left untreated for a long time. The clinical features are usually those of eczematous eruptions with weeping and crust formation.
}}

{{PMID Auto
|PMID=19396477
|Title=A novel 16p locus associated with BSCL2 hereditary motor neuronopathy: a genetic modifier?
|OA=1
}}

{{GET Evidence
|gene=LITAF
|aa_change=Ile92Val
|aa_change_short=I92V
|impact=not reviewed
|qualified_impact=Insufficiently evaluated not reviewed
|inheritance=unknown
|quality_scores=Array
|dbsnp_id=rs4280262
|overall_frequency_n=1760
|overall_frequency_d=10758
|overall_frequency=0.163599
|n_genomes=11
|n_genomes_annotated=0
|n_haplomes=12
|n_articles=0
|n_articles_annotated=0
|gene_in_genetests=Y
|genetests_testable=Y
|genetests_reviewed=Y
|nblosum100=-4
|autoscore=3
|n_web_uneval=1
}}

{{on chip | 23andMe v1}}
{{on chip | 23andMe v2}}
{{on chip | 23andMe v3}}
{{on chip | 23andMe v4}}
{{on chip | Affy GenomeWide 6}}
{{on chip | FTDNA2}}
{{on chip | HumanOmni1Quad}}
{{on chip | Illumina Human 1M}}