{{Rsnum
|rsid=477515
|Chromosome=6
|position=32601914
|Orientation=minus
|GMAF=0.2498
|Assembly=GRCh38
|GenomeBuild=38.1
|dbSNPBuild=141
|geno1=(C;C)
|geno2=(C;T)
|geno3=(T;T)
}}{{ population diversity
| geno1=(C;C)
| geno2=(C;T)
| geno3=(T;T)
| CEU | 36.3 | 42.5 | 21.2
| HCB | 65.4 | 28.7 | 5.9
| JPT | 62.8 | 32.7 | 4.4
| YRI | 62.6 | 32.7 | 4.8
| ASW | 57.9 | 38.6 | 3.5
| CHB | 65.4 | 28.7 | 5.9
| CHD | 67.0 | 31.2 | 1.8
| GIH | 50.5 | 39.6 | 9.9
| LWK | 87.3 | 10.0 | 2.7
| MEX | 46.6 | 48.3 | 5.2
| MKK | 50.0 | 44.2 | 5.8
| TSI | 61.8 | 32.4 | 5.9
| HapMapRevision=28
}}
{{PMID Auto GWAS
|PMID=18758464
|Trait=Inflammatory bowel disease
|Title=Loci on 20q13 and 21q22 are associated with pediatric-onset inflammatory bowel disease
|RiskAllele=
|Pval=1E-8
|OR=1.38
|ORtxt=[1.23-1.54]
|OA=1
}}

{{PMID Auto
|PMID=20018025
|Title=Genome-wide analysis of haplotype interaction for the data from the North American Rheumatoid Arthritis Consortium.
|OA=1
}}

{{PMID Auto
|PMID=20018071
|Title=Allelic based gene-gene interactions in rheumatoid arthritis.
|OA=1
}}

{{PMID Auto
|PMID=20018075
|Title=Genome-wide association study of rheumatoid arthritis by a score test based on wavelet transformation.
|OA=1
}}

{{PMID Auto
|PMID=20369022
|Title=Candidate causal regulatory effects by integration of expression QTLs with complex trait genetic associations.
|OA=1
}}

{{GET Evidence
|impact=pathogenic
|qualified_impact=Insufficiently evaluated pathogenic
|inheritance=unknown
|quality_scores=Array
|dbsnp_id=rs477515
|overall_frequency_n=13
|overall_frequency_d=98
|overall_frequency=0.132653
|n_genomes=9
|n_genomes_annotated=0
|n_haplomes=10
|n_articles=0
|n_articles_annotated=0
|in_gwas=Y
|autoscore=1
|webscore=N
}}

{{PMID Auto GWAS
  |PMID=23326239
  |Trait=Epstein-Barr virus immune response (EBNA-1)
  |Title=A genome-wide integrative genomic study localizes genetic factors influencing antibodies against Epstein-Barr virus nuclear antigen 1 (EBNA-1).
  |RiskAllele=T
  |Pval=3E-13
  |OR=.28
  |ORtxt=[NR] unit decrease
  |OA=1
}}

{{PMID Auto GWAS
  |PMID=24282030
  |Trait=Hepatitis B vaccine response
  |Title=A genome-wide association study identifies polymorphisms in the HLA-DR region associated with non-response to hepatitis B vaccination in Chinese Han populations.
  |RiskAllele=T
  |Pval=3E-19
  |OR=2.05
  |ORtxt=[1.75-2.41]
  }}
{{on chip | 23andMe v1}}
{{on chip | 23andMe v2}}
{{on chip | 23andMe v3}}
{{on chip | 23andMe v4}}
{{on chip | HumanOmni1Quad}}
{{on chip | Illumina Human 1M}}