{{Rsnum
|rsid=5743836
|Gene=TLR9
|Chromosome=3
|position=52226766
|Orientation=minus
|GMAF=0.1561
|Assembly=GRCh38
|GenomeBuild=38.1
|dbSNPBuild=141
|geno1=(C;C)
|geno2=(C;T)
|geno3=(T;T)
|Gene_s=TLR9
}}{{PMID Auto
|PMID=19455129
|Title=Epistasis Between Toll-Like Receptor-9 Polymorphisms and Variants in NOD2 and IL23R Modulates Susceptibility to Crohn's Disease
}}
{{PMID Auto
|PMID=20044998
|Title=Genetic risk factors for post-infectious irritable bowel syndrome following a waterborne outbreak of gastroenteritis
}}
{{PMID Auto
|PMID=20595247
|Title=Polymorphisms of innate pattern recognition receptors, response to interferon-beta and development of neutralizing antibodies in multiple sclerosis patients
}}
{{PMID Auto
|PMID=22132241
|Title=The C Allele of rs5743836 Polymorphism in the Human TLR9 Promoter Links IL-6 and TLR9 Up-Regulation and Confers Increased B-Cell Proliferation
|OA=1
}}
{{PMID Auto
|PMID=21752155
|Title=Genetic susceptibility to inflammation and colonic transit in lower functional gastrointestinal disorders: preliminary analysis
|OA=1
}}
{{PMID Auto
|PMID=22594374
|Title=Toll-like receptor 9 (TLR9) polymorphism associated with symptomatic malaria: a cohort study
|OA=1
}}
{{PMID Auto
|PMID=22717578
|Title=TLR9 agonists induced cell death in Burkitt's lymphoma cells is variable and influenced by TLR9 polymorphism
|OA=1
}}{{PMID|16859562|OA=1
}} Do host genetic traits in the bacterial sensing system play a role in the development of Chlamydia trachomatis-associated tubal pathology in subfertile women?

{{PMID|17516623}} Association study of Toll-like receptor 5 (TLR5) and Toll-like receptor 9 (TLR9) polymorphisms in systemic lupus erythematosus.

{{PMID|18396467|OA=1
}} Genetic variation and haplotype structures of innate immunity genes in eastern India.

{{PMID|18776126|OA=1
}} Toll-like receptor 9 affects severity of IgA nephropathy.

{{PMID|19034965|OA=1
}} Genetic determination of irritable bowel syndrome.

{{PMID|19134200|OA=1
}} No evidence of major effects in several Toll-like receptor gene polymorphisms in rheumatoid arthritis.

{{PMID|19284650|OA=1
}} TLR9 polymorphisms in African populations: no association with severe malaria, but evidence of cis-variants acting on gene expression.

{{PMID|19390575|OA=1
}} Lung cancer susceptibility model based on age, family history and genetic variants.

{{PMID|20026892}} [Association of Toll-like receptor gene with Crohn's disease in Koreans].

{{PMID|20646321|OA=1
}} Toll-like receptor (TLR) and nucleosome-binding oligomerization domain (NOD) gene polymorphisms and endometrial cancer risk.

{{PMID|21324137|OA=1
}} Comprehensive genetic assessment of a functional TLR9 promoter polymorphism: no replicable association with asthma or asthma-related phenotypes.

{{PMID|21462132}} [Association of single nucleotide polymorphisms in the promoter region of the TLR9 gene with childhood atopic asthma].

{{PMID|21595536}} Investigation of association between TLR9 gene polymorphisms and VKH in Japanese patients.

{{PMID|21872627}} Association of polymorphisms in TLR genes and in genes of the Toll-like receptor signaling pathway with cancer risk.

{{PMID|22065095}} TLR7/8/9 polymorphisms and their associations in systemic lupus erythematosus patients from southern Brazil.
{{PMID Auto
|PMID=22691414
|Title=Role of polymorphisms of toll-like receptor (TLR) 4, TLR9, toll-interleukin 1 receptor domain containing adaptor protein (TIRAP) and FCGR2A genes in malaria susceptibility and severity in Burundian children
|OA=1
}}
{{PMID Auto
|PMID=22494793
|Title=Innate immunity gene single nucleotide polymorphisms and otitis media
}}
{{PMID Auto
|PMID=23677790
|Title=Polymorphism in the promoter region of the Toll-Like Receptor 9 gene and cervical human papillomavirus infection
}}
{{PMID Auto
|PMID=24004541
|Title=Association study of TLR-9 polymorphisms and systemic lupus erythematosus in Northern Chinese Han population
}}{{PMID Auto
|PMID=22740716
|Title=Toll-like receptor and hepatitis B virus clearance in chronic infected patients: a long-term prospective cohort study in Taiwan.
}}

{{PMID Auto
|PMID=22948541
|Title=Contribution of toll-like receptor 9 gene single-nucleotide polymorphism to systemic lupus erythematosus.
|OA=1
}}
{{PMID Auto
|PMID=23990988
|Title=The TLR9 gene polymorphisms and the risk of cancer: evidence from a meta-analysis
|OA=1
}}