{{Rsnum
|rsid=6030171
|Gene=PTPRT
|Chromosome=20
|position=42365454
|Orientation=plus
|GMAF=0.4633
|Gene_s=PTPRT
|Assembly=GRCh38
|GenomeBuild=38.1
|dbSNPBuild=141
|geno1=(C;C)
|geno2=(C;T)
|geno3=(T;T)
}}{{ population diversity
| geno1=(C;C)
| geno2=(C;T)
| geno3=(T;T)
| CEU | 8.0 | 46.0 | 46.0
| HCB | 37.5 | 53.7 | 8.8
| JPT | 47.3 | 39.3 | 13.4
| YRI | 29.9 | 49.0 | 21.1
| ASW | 12.3 | 64.9 | 22.8
| CHB | 37.5 | 53.7 | 8.8
| CHD | 40.4 | 50.5 | 9.2
| GIH | 13.9 | 43.6 | 42.6
| LWK | 34.5 | 51.8 | 13.6
| MEX | 19.0 | 44.8 | 36.2
| MKK | 19.9 | 52.6 | 27.6
| TSI | 14.9 | 38.6 | 46.5
| HapMapRevision=28
}}{{PMID Auto GWAS
  |PMID=23382691
  |Trait=IgG glycosylation
  |Title=Loci associated with N-glycosylation of human immunoglobulin G show pleiotropy with autoimmune diseases and haematological cancers.
  |RiskAllele=C
  |Pval=3E-6
  |OR=.15
  |ORtxt=[0.086-0.21] unit decrease
  |OA=1
}}

{{on chip | 23andMe v1}}
{{on chip | 23andMe v2}}
{{on chip | 23andMe v3}}
{{on chip | 23andMe v4}}
{{on chip | Affy GenomeWide 6}}
{{on chip | Illumina Human 1M}}